Tag Archives: scifund

The Open IGERT Proposal

I’ve been saying for months that I want to submit a proposal to the NSF for an open science IGERT. Well the call for such a proposal dropped into my lab a week ago and UNM is doing a limited competition to pick the best proposal to send into the NSF.

Since I’m an open notebook scientist and everything, I’m going to write this proposal openly despite my actual fears about doing so. Because it’s best to be open!

Some key aspects of the proposal are that the NSF is looking to train students in the ways of data management and to do science in the 21st century. So I’m pairing with UNM Library Scientist Rob Olendorf to design an open science repository for UNM students (for data, blogs, notebooks, etc) and we are going to train students on modern data management techniques and how to do science openly, online.

Right now, these thoughts are still being hashed out but you can see the progress we’re making in this document:

IGERT Proposal

And if you haven’t checked out my rockethub project please do so!

My #SciFund Project: The effect of water on life http://rkthb.co/7531

Here. It. Is.

I’m so happy that everything with the proposal is complete. It was a ton of time and effort, but the experience of it all was so worth it. I want to thank Dr. Jai Ranganathan and Dr. Jarrett Byrnes for their dedication to the project, and all the support and feedback they provided to everyone in the Challenge.

I also want to thank and promote each and every person in the #SciFund Challenge. It should be known that this was a community effort. Each of our projects had some contribution from other members in the community, and we all had something to give. We all did so much behind the scenes, and it was such a wonderful experience.

I also want to personally thank my friends and family who helped give me feedback on my project:

  • Barbara Toledo-Buglione (mother)
  • Lou Salvagno (father)
  • Elaine Allen (titi)
  • My advisor Steve Koch
  • My undergrad mentee Alex Haddad (who also helped me film the movie)
  • Bill Hooker
  • Ms. Banana

Now I want to invite each and everyone of you in the world to check out my proposal. Any contribution would be greatly appreciated (and I will personally thank you as well), and promoting my project would be appreciated even more! My hope is that together, we can bust science open!

The last leg of the #SciFund Challenge Round 2

I’m here in the home stretch! I’ll write up a review of the proposal process in about a day or two, and a final review of my crowdfunding experience when all is said and done. But right now I just wanted to say that my proposal is uploaded to RocketHub, it will go live tomorrow (and I’ll link to it in this very notebook), and my video is finished. I have a lot to say about the video editing process which was much more complex then previous video creating endeavors in the past.

But, without further adieu here is my video masterpiece:

And direct link.

#SciFunders around the world!

I created a map for all the #SciFund-ers to add their locations to. In this way we can see how diverse the research in the Challenge is! And my hope is that as the #SciFund challenge grows the map will be more populated and everyone can see how useful crowdfunding for research really is!!


View Scifunders Standing Tall and Talented in a larger map

#SciFund video planning

Potential script:

Deuterium (D) is the isotope of hydrogen containing 1 neutron.  It exists in all the water we normally–about one out of every 6,000 hydrogens is deuterium.  Immediately after “heavy water” was purified in the early 1930’s, its dramatic effect on living systems was demonstrated by Gilbert Lewis and others.  Most higher organisms (such as tobacco seeds) die in pure heavy water.  In his 1934 Science paper summarizing some of this work, Lewis hypothesized that trace deuterium,though,  may be essential for some plants or animals and that it should be studied by using deuterium-depleted water.  Despite this fascinating prediction from one of the most brilliant scientists of the early 20th century, there exists almost no published research on this question!  Even worse, the internet is dominated by claims that drinking deuterium-depleted water can cure cancer and other ailments, with almost no reliable research to back up the claims. It’s an open and fascinating question: have cells evolved to use naturally-occurring deuterium?  Are we yet to discover fascinating cellular mechanisms that rely on deuterium?

 

By using the model organisms yeast and E. coli, I hope to uncover basic mechanisms that may be affected by deuterium, and hopefully I can dispel the internet rumors. What’s more I’ll be doing all this research openly so contributors to my project can see the results of my experiments in real time. Not only this, but by sharing my methods and protocols other scientists will be able to build on my experiments.

Video sequence:

  1. open on water dripping out of electronic pipette
  2. show slideshow of plants growing in d2o
  3. show footage of anthony preparing e coli/yeast for incubation
  4. footage of anthony using microscope
  5. footage of yeast/ecoli in microscope
  6. end with kochlab science that sizzles video

Please critique my #SciFund proposal

https://docs.google.com/document/d/15y12xbD9tNVdw5taQU9EAiWDHai4215Fx3zLAeXu7l8/edit

My #SciFund Proposal (a work in progress)

I just wanted to get this up today. Here is my #SciFund proposal on Google Docs. It is publicly open for comments. I won’t have a rough draft done until later today or early tomorrow so be sure to check back frequently. But in the spirit of open notebook science, I figured everyone deserves a chance to see the evolution in real time.


DDW Effects on Microorganisms